CausalSentinel

Protein Dossier — CCL3L1 (C-C motif chemokine 3-like 1)

MR feasibility tier: A — Published pQTL-MR estimates exist for this protein (retrieved below - not computed here).

1. Published MR estimates (retrieved, not computed)

Outcome beta se p method nSNP cis/trans coloc
Neo-openness to experience -0.613 0.214 0.00408 Wald ratio 1 cis NA
Eye problems or disorders: Injury or trauma resulting in loss of vision -0.333 0.133 0.0124 Wald ratio 1 cis NA
Pallidum volume -13.1 5.63 0.0199 Wald ratio 1 cis NA
HDL cholesterol 0.0335 0.0145 0.0211 Wald ratio 1 cis NA
Diagnoses - main ICD10: G47 Sleep disorders -0.295 0.128 0.0215 Wald ratio 1 cis NA
Crohn’s disease 0.0798 0.0362 0.0275 Wald ratio 1 cis NA
Underlying (primary) cause of death: ICD10: E85.4 Organ-limited amyloidosis 1.34 0.61 0.028 Wald ratio 1 cis NA
Diagnoses - main ICD10: I84 Haemorrhoids 0.0915 0.0422 0.0301 Wald ratio 1 cis NA
Amyotrophic lateral sclerosis 0.108 0.0522 0.0378 Wald ratio 1 cis NA
Diagnoses - main ICD10: J33 Nasal polyp -0.286 0.142 0.0441 Wald ratio 1 cis NA
Eczema 0.104 0.052 0.0458 Wald ratio 1 cis NA
Thalamus volume -36.3 18.5 0.05 Wald ratio 1 cis NA
…and 82 more outcomes (see JSON)              

2. pQTL instrument availability (Tier-B probe)

Dataset Trait Author Year
prot-c-2783_18_2 LD78-beta Suhre K 2019

3. GWAS Catalog results — traits with signal at this locus

No GWAS Catalog associations mapped to this gene.

4. Phenome map — where this gene is a genetic locus, vs. where MR exists

No genetically-associated diseases retrieved from Open Targets.

5. Downstream annotation (druggability & safety preview)

Layer Result
ChEMBL druggability not available — no ChEMBL target (undrugged)
gnomAD constraint not available
GWAS Catalog no mapped SNPs
ClinVar 35 records; 21 pathogenic in sample of 30
PharmGKB/ClinPGx no annotations

Caveats declared by the tools

Sources

Provenance