CausalSentinel

Protein Dossier — CD177 (CD177 antigen)

MR feasibility tier: A — Published pQTL-MR estimates exist for this protein (retrieved below - not computed here).

1. Published MR estimates (retrieved, not computed)

Outcome beta se p method nSNP cis/trans coloc
Non-cancer illness code self-reported: diverticular disease or diverticulitis 0.133 0.0457 0.00349 Wald ratio 1 cis NA
Non-cancer illness code self-reported: gout -0.123 0.0524 0.0185 Wald ratio 1 cis NA
Diagnoses - main ICD10: D25 Leiomyoma of uterus -0.119 0.055 0.0297 Wald ratio 1 cis NA
Lung adenocarcinoma -0.0941 0.0435 0.0305 Wald ratio 1 cis NA
Pulse rate -0.0199 0.00962 0.0389 Wald ratio 1 cis NA
Eye problems or disorders: Glaucoma -0.101 0.0506 0.0455 Wald ratio 1 cis NA
Non-cancer illness code self-reported: hayfever or allergic rhinitis -0.0471 0.0238 0.0475 Wald ratio 1 cis NA
Invasive mucinous ovarian cancer -0.172 0.0874 0.0485 Wald ratio 1 cis NA
Endometrioid ovarian cancer -0.122 0.0644 0.0583 Wald ratio 1 cis NA
Heel bone mineral density (BMD) T-score automated -0.0135 0.00713 0.0585 Wald ratio 1 cis NA
Fractured bone site(s): Arm -0.117 0.0626 0.0624 Wald ratio 1 cis NA
Non-cancer illness code self-reported: vitiligo 0.428 0.232 0.0642 Wald ratio 1 cis NA
…and 63 more outcomes (see JSON)              

2. pQTL instrument availability (Tier-B probe)

No prot-* pQTL GWAS dataset found for this protein (matched by UniProt accession and symbol).

3. GWAS Catalog results — traits with signal at this locus

38 association rows across 15 traits (36 genome-wide significant rows). Associations are loci, not causal claims; the mapped gene at a locus is not necessarily the effector gene.

Trait best p lead SNP n assoc study MR status
Circulating CD177 levels 9e-265 rs1806750 2 GCST90860625 no MR -> candidate analysis
CD177 antigen levels 1e-154 rs11671567 10 GCST90246932 no MR -> candidate analysis
CD177 protein levels 3e-72 rs150484653 4 GCST90468603 no MR -> candidate analysis
TNFRSF10C protein levels 7e-67 rs3816437 2 GCST90470901 no MR -> candidate analysis
CD177 antigen levels (CD177.13116.25.3) 2e-65 rs587670082 4 GCST90240637 no MR -> candidate analysis
PSG1 protein levels 2e-59 rs118164011 2 GCST90470353 no MR -> candidate analysis
Serum levels of protein CD177 2e-52 rs28464741 5 GCST90087384 no MR -> candidate analysis
CEACAM21 protein levels 5e-20 rs77513223 1 GCST90468694 no MR -> candidate analysis
PLAU protein levels 2e-16 rs3816437 1 GCST90470252 no MR -> candidate analysis
TNFSF10 protein levels 2e-15 rs28464741 1 GCST90470917 no MR -> candidate analysis
PINLYP protein levels 2e-13 rs367925083 2 GCST90470238 no MR -> candidate analysis
Serum levels of protein PCDHGA1 4e-11 rs12975477 1 GCST90089439 no MR -> candidate analysis
…and 3 more traits (see JSON)          

4. Phenome map — where this gene is a genetic locus, vs. where MR exists

No genetically-associated diseases retrieved from Open Targets.

5. Downstream annotation (druggability & safety preview)

Layer Result
ChEMBL druggability not available — no ChEMBL target (undrugged)
gnomAD constraint pLI=2e-15, LOEUF=1.39 — LoF-tolerant
GWAS Catalog 129 unique SNPs / 312 rows
ClinVar 111 records; 0 pathogenic in sample of 30
PharmGKB/ClinPGx no annotations

Caveats declared by the tools

Sources

Provenance