CausalSentinel

Protein Dossier — CD300A (CMRF35-like molecule 8)

MR feasibility tier: A — Published pQTL-MR estimates exist for this protein (retrieved below - not computed here).

1. Published MR estimates (retrieved, not computed)

Outcome beta se p method nSNP cis/trans coloc
Diastolic blood pressure automated reading -0.0199 0.00707 0.00479 Wald ratio 1 cis NA
Years of schooling 0.0322 0.0115 0.00511 Wald ratio 1 cis NA
Systolic blood pressure automated reading -0.0194 0.00706 0.00602 Wald ratio 1 cis NA
Non-cancer illness code self-reported: hypopituitarism 0.55 0.23 0.0169 Wald ratio 1 cis NA
Diagnoses - main ICD10: D25 Leiomyoma of uterus 0.128 0.0538 0.0174 Wald ratio 1 cis NA
Fasting glucose -0.0253 0.011 0.0219 Wald ratio 1 cis NA
Diagnoses - main ICD10: K80 Cholelithiasis -0.123 0.0546 0.0237 Wald ratio 1 cis NA
Diagnoses - main ICD10: R04 Haemorrhage from respiratory passages 0.179 0.0808 0.0263 Wald ratio 1 cis NA
Ferritin -0.0563 0.0269 0.0363 Wald ratio 1 cis NA
Primary sclerosing cholangitis -0.2 0.0966 0.0381 Wald ratio 1 cis NA
Non-cancer illness code self-reported: emphysema or chronic bronchitis 0.111 0.0536 0.0386 Wald ratio 1 cis NA
Hirschsprung’s disease -0.795 0.388 0.0402 Wald ratio 1 cis NA
…and 95 more outcomes (see JSON)              

2. pQTL instrument availability (Tier-B probe)

No prot-* pQTL GWAS dataset found for this protein (matched by UniProt accession and symbol).

3. GWAS Catalog results — traits with signal at this locus

51 association rows across 29 traits (47 genome-wide significant rows). Associations are loci, not causal claims; the mapped gene at a locus is not necessarily the effector gene.

Trait best p lead SNP n assoc study MR status
Circulating CD300C levels 2e-1141 rs1171197 4 GCST90859659 no MR -> candidate analysis
CD300C/HAVCR2 protein level ratio 7e-1127 rs1171196 1 GCST90313789 no MR -> candidate analysis
CD300C/NBL1 protein level ratio 5e-982 rs1171196 1 GCST90313792 no MR -> candidate analysis
CD300C/MANSC1 protein level ratio 3e-963 rs1171196 1 GCST90313791 no MR -> candidate analysis
CD300C/FOLR2 protein level ratio 1e-950 rs1171196 1 GCST90313787 no MR -> candidate analysis
CD300C/CLEC14A protein level ratio 3e-838 rs1171196 1 GCST90313786 no MR -> candidate analysis
CD300C/GOLM2 protein level ratio 9e-805 rs1171196 1 GCST90313788 no MR -> candidate analysis
CMRF35-like molecule 8 levels 1e-360 rs2272111 4 GCST90247074 no MR -> candidate analysis
CD300C protein levels 2e-254 rs577654240 6 GCST90468620 no MR -> candidate analysis
CMRF35-like molecule 6 levels 2e-139 rs62087200 5 GCST90247072 no MR -> candidate analysis
CD300A protein levels 3e-94 rs750453552 2 GCST90468619 no MR -> candidate analysis
Serum levels of protein CD300A 4e-84 rs2272111 2 GCST90089106 no MR -> candidate analysis
…and 17 more traits (see JSON)          

4. Phenome map — where this gene is a genetic locus, vs. where MR exists

Top diseases by Open Targets association (of 161 total). Associations are loci, not causal claims. The causal-status column is a four-state triage per pair: established (curated) = a curated clinical assertion exists (ClinGen/G2P/GEL/Orphanet/ClinVar — any validity level, MR adds little); exploratory rare-variant signal = ExWAS burden evidence without curation — a candidate NEW gene-disease relationship; common-variant locus = GWAS signal, classic pQTL-MR territory; multi-layer = burden+GWAS together, an allelic-series candidate (the strongest causal setup). Burden estimand is carrier-vs-noncarrier, not per-SD MR.

Disease genetic assoc. burden (ExWAS) causal status MR status
injury 0.432 common-variant locus MR: beta=0.145, p=0.0638 (cis)
non-autoimmune hemolytic anemia 0.065 common-variant locus no MR -> candidate analysis

Of the 2 rows above, 1 have no MR estimate in this resource. Across all retrieved diseases for this gene: 0 exploratory rare-variant signal(s), 0 multi-layer (allelic-series candidate) pair(s). Final triage still belongs to a statistical geneticist.

5. Downstream annotation (druggability & safety preview)

Layer Result
ChEMBL druggability not available — no ChEMBL target (undrugged)
gnomAD constraint pLI=1.8e-05, LOEUF=0.936 — LoF-tolerant
GWAS Catalog 71 unique SNPs / 142 rows
ClinVar 84 records; 1 pathogenic in sample of 30
PharmGKB/ClinPGx no annotations

Caveats declared by the tools

Sources

Provenance