CausalSentinel

Protein Dossier — KLK14 (Kallikrein-14)

MR feasibility tier: A — Published pQTL-MR estimates exist for this protein (retrieved below - not computed here).

1. Published MR estimates (retrieved, not computed)

Outcome beta se p method nSNP cis/trans coloc
Diagnoses - main ICD10: S76 Injury of muscle and tendon at hip and thigh level 0.432 0.144 0.0027 Wald ratio 1 cis NA
ER-negative Breast cancer (Combined Oncoarray; iCOGS; GWAS meta analysis) 0.0541 0.021 0.0102 Wald ratio 1 cis NA
Squamous cell lung cancer -0.123 0.0479 0.0104 Wald ratio 1 cis NA
Non-cancer illness code self-reported: retinal detachment 0.167 0.0675 0.0131 Wald ratio 1 cis NA
Body mass index (BMI) 0.0112 0.00455 0.0142 Wald ratio 1 cis NA
Small vessel disease -0.155 0.0663 0.0194 Wald ratio 1 cis NA
Diagnoses - main ICD10: D25 Leiomyoma of uterus -0.102 0.0446 0.0226 Wald ratio 1 cis NA
Diagnoses - main ICD10: L03 Cellulitis 0.103 0.0458 0.0246 Wald ratio 1 cis NA
Diagnoses - main ICD10: K40 Inguinal hernia -0.066 0.0298 0.0266 Wald ratio 1 cis NA
Mean platelet volume -0.00435 0.00209 0.0372 Wald ratio 1 cis NA
Diagnoses - main ICD10: C61 Malignant neoplasm of prostate 0.104 0.0505 0.0396 Wald ratio 1 cis NA
Non-cancer illness code self-reported: joint disorder -0.158 0.0784 0.0446 Wald ratio 1 cis NA
…and 96 more outcomes (see JSON)              

2. pQTL instrument availability (Tier-B probe)

Dataset Trait Author Year
prot-c-3681_87_3 kallikrein 14 Suhre K 2019

3. GWAS Catalog results — traits with signal at this locus

71 association rows across 28 traits (69 genome-wide significant rows). Associations are loci, not causal claims; the mapped gene at a locus is not necessarily the effector gene.

Trait best p lead SNP n assoc study MR status
Circulating KLK14 levels 3e-856 rs2569491 5 GCST90860034 no MR -> candidate analysis
Circulating KLK13 levels 1e-322 rs2569476 2 GCST90860002 no MR -> candidate analysis
KLK14 protein levels 8e-231 rs34093024 12 GCST90469700 no MR -> candidate analysis
Kallikrein-14 levels (KLK14.8620.56.3) 4e-119 rs2569491 2 GCST90241672 no MR -> candidate analysis
Serum levels of protein KLK14 9e-114 rs2569491 2 GCST90090240 no MR -> candidate analysis
KLK13 protein levels 2e-110 rs7253072 4 GCST90469699 no MR -> candidate analysis
CD33 protein levels 2e-106 rs867191 3 GCST90468625 no MR -> candidate analysis
Blood protein levels 3e-86 rs2569491 2 GCST006585 no MR -> candidate analysis
Sialic acid-binding Ig-like lectin 9 levels 3e-73 rs2691273 5 GCST90101552 no MR -> candidate analysis
KLK12 protein levels 1e-68 rs2569495 9 GCST90469698 no MR -> candidate analysis
SIGLEC9 protein levels 3e-53 rs73051055 5 GCST90470637 no MR -> candidate analysis
Circulating SIGLEC7 levels 2e-47 rs2569495 1 GCST90860368 no MR -> candidate analysis
…and 16 more traits (see JSON)          

4. Phenome map — where this gene is a genetic locus, vs. where MR exists

Top diseases by Open Targets association (of 117 total). Associations are loci, not causal claims. The causal-status column is a four-state triage per pair: established (curated) = a curated clinical assertion exists (ClinGen/G2P/GEL/Orphanet/ClinVar — any validity level, MR adds little); exploratory rare-variant signal = ExWAS burden evidence without curation — a candidate NEW gene-disease relationship; common-variant locus = GWAS signal, classic pQTL-MR territory; multi-layer = burden+GWAS together, an allelic-series candidate (the strongest causal setup). Burden estimand is carrier-vs-noncarrier, not per-SD MR.

Disease genetic assoc. burden (ExWAS) causal status MR status
alcohol drinking 0.191 common-variant locus no MR -> candidate analysis
male infertility 0.182 established (curated) no MR -> candidate analysis

Of the 2 rows above, 2 have no MR estimate in this resource. Across all retrieved diseases for this gene: 0 exploratory rare-variant signal(s), 0 multi-layer (allelic-series candidate) pair(s). Final triage still belongs to a statistical geneticist.

5. Downstream annotation (druggability & safety preview)

Layer Result
ChEMBL druggability 0 known modulators (Kallikrein-14)
gnomAD constraint pLI=5.5e-07, LOEUF=1.23 — LoF-tolerant
GWAS Catalog 175 unique SNPs / 448 rows
ClinVar 56 records; 0 pathogenic in sample of 30
PharmGKB/ClinPGx no annotations

Caveats declared by the tools

Sources

Provenance