CausalSentinel

Protein Dossier — NAAA (N-acylethanolamine-hydrolyzing acid amidase)

MR feasibility tier: A — Published pQTL-MR estimates exist for this protein (retrieved below - not computed here).

1. Published MR estimates (retrieved, not computed)

Outcome beta se p method nSNP cis/trans coloc
Rheumatoid arthritis -0.089 0.0309 0.00396 Wald ratio 1 cis NA
Eczema -0.0963 0.0338 0.00435 Wald ratio 1 cis NA
Hearing difficulty or problems: Yes -0.0244 0.00863 0.00474 Wald ratio 1 cis NA
Thyroid cancer 0.456 0.163 0.00507 Wald ratio 1 cis NA
Endometrioid ovarian cancer 0.148 0.0579 0.0105 Wald ratio 1 cis NA
Alzheimer’s disease 0.0797 0.0323 0.0136 Wald ratio 1 cis NA
Non-cancer illness code self-reported: migraine -0.0685 0.0302 0.0234 Wald ratio 1 cis NA
Age at menopause -0.0729 0.0365 0.0455 Wald ratio 1 cis NA
Fasting proinsulin 0.0292 0.0146 0.0455 Wald ratio 1 cis NA
Diagnoses - main ICD10: R04 Haemorrhage from respiratory passages 0.119 0.0604 0.0488 Wald ratio 1 cis NA
Diagnoses - main ICD10: K44 Diaphragmatic hernia 0.0717 0.0364 0.0489 Wald ratio 1 cis NA
Diagnoses - main ICD10: M23 Internal derangement of knee 0.0601 0.0309 0.0517 Wald ratio 1 cis NA
…and 98 more outcomes (see JSON)              

2. pQTL instrument availability (Tier-B probe)

Dataset Trait Author Year
prot-c-3173_49_2 ASAHL Suhre K 2019

3. GWAS Catalog results — traits with signal at this locus

42 association rows across 22 traits (40 genome-wide significant rows). Associations are loci, not causal claims; the mapped gene at a locus is not necessarily the effector gene.

Trait best p lead SNP n assoc study MR status
Circulating NAAA levels 2e-2150 rs112197434 3 GCST90859725 no MR -> candidate analysis
CTSF/NAAA protein level ratio 6e-2078 rs4859572 1 GCST90314314 no MR -> candidate analysis
CREG1/NAAA protein level ratio 3e-1897 rs4859572 1 GCST90314250 no MR -> candidate analysis
NAAA/SMPD1 protein level ratio 2e-1786 rs4859572 1 GCST90315510 no MR -> candidate analysis
CTSZ/NAAA protein level ratio 7e-1722 rs4859572 1 GCST90314320 no MR -> candidate analysis
N-acylethanolamine-hydrolyzing acid amidase levels 1e-570 rs111981122 12 GCST90248592 no MR -> candidate analysis
Serum levels of protein NAAA 1e-263 rs10518142 3 GCST90088245 no MR -> candidate analysis
CXCL10/CXCL9 protein level ratio 1e-233 rs13118503 1 GCST90314331 no MR -> candidate analysis
Blood protein levels 4e-159 rs58317633 2 GCST006585 no MR -> candidate analysis
N-acylethanolamine-hydrolyzing acid amidase levels (NAAA.317 4e-101 rs9996608 3 GCST90242013 no MR -> candidate analysis
NAAA protein levels 4e-99 rs7664613 3 GCST90469991 no MR -> candidate analysis
N-acylethanolamine-hydrolyzing acid amidase level in Chronic 4e-72 rs111427893 1 GCST90237251 no MR -> candidate analysis
…and 10 more traits (see JSON)          

4. Phenome map — where this gene is a genetic locus, vs. where MR exists

Top diseases by Open Targets association (of 165 total). Associations are loci, not causal claims. The causal-status column is a four-state triage per pair: established (curated) = a curated clinical assertion exists (ClinGen/G2P/GEL/Orphanet/ClinVar — any validity level, MR adds little); exploratory rare-variant signal = ExWAS burden evidence without curation — a candidate NEW gene-disease relationship; common-variant locus = GWAS signal, classic pQTL-MR territory; multi-layer = burden+GWAS together, an allelic-series candidate (the strongest causal setup). Burden estimand is carrier-vs-noncarrier, not per-SD MR.

Disease genetic assoc. burden (ExWAS) causal status MR status
Tietze syndrome 0.41 common-variant locus no MR -> candidate analysis
cellulitis 0.41 common-variant locus MR: beta=0.0877, p=0.0785 (cis)
abscess 0.41 common-variant locus no MR -> candidate analysis
familial hemolytic anemia 0.295 common-variant locus no MR -> candidate analysis
type 2 diabetes mellitus 0.039 common-variant locus no MR -> candidate analysis
device complication 0.038 common-variant locus no MR -> candidate analysis

Of the 6 rows above, 5 have no MR estimate in this resource. Across all retrieved diseases for this gene: 0 exploratory rare-variant signal(s), 0 multi-layer (allelic-series candidate) pair(s). Final triage still belongs to a statistical geneticist.

5. Downstream annotation (druggability & safety preview)

Layer Result
ChEMBL druggability 0 known modulators (N-acylethanolamine-hydrolyzing acid amidase)
gnomAD constraint pLI=3.2e-12, LOEUF=1.14 — LoF-tolerant
GWAS Catalog 93 unique SNPs / 186 rows
ClinVar 110 records; 2 pathogenic in sample of 30
PharmGKB/ClinPGx no annotations

Caveats declared by the tools

Sources

Provenance