CausalSentinel

Protein Dossier — NOV (Plexin-A1)

MR feasibility tier: A — Published pQTL-MR estimates exist for this protein (retrieved below - not computed here).

1. Published MR estimates (retrieved, not computed)

Outcome beta se p method nSNP cis/trans coloc
Diastolic blood pressure automated reading -0.121 0.0142 1.99e-17 Wald ratio 1 cis 0.908
Diagnoses - main ICD10: M72 Fibroblastic disorders 0.632 0.102 4.96e-10 Wald ratio 1 cis 0.756
Height -0.101 0.0163 6.56e-10 Wald ratio 1 cis 0.6
Systolic blood pressure automated reading 0.0863 0.0142 1.31e-09 Wald ratio 1 cis 0.825
Forced vital capacity (FVC) -0.0654 0.0114 9.43e-09 Wald ratio 1 cis 0.876
Weight -0.0496 0.0123 5.17e-05 Wald ratio 1 cis NA
Forced expiratory volume in 1-second (FEV1) -0.0457 0.012 1.41e-04 Wald ratio 1 cis NA
Forearm bone mineral density 0.312 0.0921 6.94e-04 Wald ratio 1 cis NA
Non-cancer illness code self-reported: anxiety or panic attacks 0.28 0.0912 0.00211 Wald ratio 1 cis NA
Diagnoses - main ICD10: K57 Diverticular disease of intestine -0.393 0.149 0.00818 Wald ratio 1 cis NA
Diagnoses - main ICD10: I84 Haemorrhoids -0.273 0.119 0.022 Wald ratio 1 cis NA
Lung cancer -0.228 0.0997 0.022 Wald ratio 1 cis NA
…and 102 more outcomes (see JSON)              

2. pQTL instrument availability (Tier-B probe)

No prot-* pQTL GWAS dataset found for this protein (matched by UniProt accession and symbol).

3. GWAS Catalog results — traits with signal at this locus

No GWAS Catalog associations mapped to this gene.

4. Phenome map — where this gene is a genetic locus, vs. where MR exists

Top diseases by Open Targets association (of 210 total). Associations are loci, not causal claims. The causal-status column is a four-state triage per pair: established (curated) = a curated clinical assertion exists (ClinGen/G2P/GEL/Orphanet/ClinVar — any validity level, MR adds little); exploratory rare-variant signal = ExWAS burden evidence without curation — a candidate NEW gene-disease relationship; common-variant locus = GWAS signal, classic pQTL-MR territory; multi-layer = burden+GWAS together, an allelic-series candidate (the strongest causal setup). Burden estimand is carrier-vs-noncarrier, not per-SD MR.

Disease genetic assoc. burden (ExWAS) causal status MR status
intellectual disability, X-linked, syndromic, 35 0.822 established (curated) no MR -> candidate analysis

Of the 1 rows above, 1 have no MR estimate in this resource. Across all retrieved diseases for this gene: 0 exploratory rare-variant signal(s), 0 multi-layer (allelic-series candidate) pair(s). Final triage still belongs to a statistical geneticist.

5. Downstream annotation (druggability & safety preview)

Layer Result
ChEMBL druggability not available — no ChEMBL target (undrugged)
gnomAD constraint not available
GWAS Catalog 1 unique SNPs / 2 rows
ClinVar no records
PharmGKB/ClinPGx no annotations

Caveats declared by the tools

Sources

Provenance